NEWS

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phylotypr 0.1.1 (2025-02-21)

This is a patch release to...

• update the citation
• change the license to GPL v3
• make a small change to the behavior of the code for when a k-mer shows up more than once in a sequence

phylotypr 0.1.0 (2024-10-14)

This is the first release version of phylotypr! 🎉

• Functions:
  • read_fasta()
  • read_taxonomy()
  • build_kmer_database()
  • classify_sequence()
  • filter_taxonomy()
  • print_taxonomy()
• Example datasets:
  • trainset9_rdp
  • trainset9_pds
• Vignette:
  • Getting started